BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D07SP1|AL429215
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1724 0.0
>3x_Contig1397
Length = 8011
Score = 1724 bits (867), Expect = 0.0
Identities = 881/887 (99%), Gaps = 1/887 (0%)
Strand = Plus / Minus
Query: 1 gtgcaaatattaatcgwtccttacttgcattaggaaattgcataaacgcattatgcgtgt 60
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6120 gtgcaaatattaatcgatccttactagcattaggaaattgcataaacgcattatgcgtgt 6061
Query: 61 catctacgagaacgggattctcctgtcacgtaccatatagggattcaaagttgaccagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6060 catctacgagaacgggattctcctgtcacgtaccatatagggattcaaagttgaccagat 6001
Query: 121 tgctcaagttttctttaggaggaaattgtaaaacagttatgatagtttgtgtatctccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6000 tgctcaagttttctttaggaggaaattgtaaaacagttatgatagtttgtgtatctccta 5941
Query: 181 gtagtgggcactatgatgaaactcttaacacacttaaatatgctaatagggcaaaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5940 gtagtgggcactatgatgaaactcttaacacacttaaatatgctaatagggcaaaagaga 5881
Query: 241 tcaagactaaagtaatacggaataaacagtcattggatagacacgtcggatcgtatctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5880 tcaagactaaagtaatacggaataaacagtcattggatagacacgtcggatcgtatctaa 5821
Query: 301 aactaataacagagcagaaaagcgaaatagaagagctacgatcaagagaacaaaagatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5820 aactaataacagagcagaaaagcgaaatagaagagctacgatcaagagaacaaaagatga 5761
Query: 361 ttgahattcagttgtctcaatttaggaacggaagggaaaaagttaatatgttgattaaag 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5760 ttgaaattcagttgtctcaatttaggaacggaagggaaaaagttaatatgttgattaaag 5701
Query: 421 aatccgtacgagaaatgaggattcatctttcagattcggaaaagattcaagatgcaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5700 aatccgtacgagaaatgaggattcatctttcagattcggaaaagattcaagatgcaaaat 5641
Query: 481 tgataaaatcattgatgttggtg-aacgacactatctaaagctagttcatttcgagttaa 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5640 tgataaaatcattgatgttggtgaaacgacactatctaaagctagttcatttcgagttaa 5581
Query: 540 gcaacgtactgcaatatttgaacaacttgaatgatgaaagggcggtatttcttacagaca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5580 gcaacgtactgcaatatttgaacaacttgaatgatgaaagggcggtatttcttacagaca 5521
Query: 600 acatccatattattcaagaacagattttgttgaagatgaatgaacttgaagttcaattcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5520 acatccatattattcaagaacagattttgttgaagatgaatgaacttgaagttcaattcg 5461
Query: 660 atgatccaaatgatatcgatcgtaccttagaatatatgawaaccatccagttgaaaaaaa 719
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5460 atgatccaaatgatatcgatcgtaccttagaatatatgaaaaccatccagttgaaaaaaa 5401
Query: 720 tgcgagactgcgagtattggcaagaggccattgatttcgaacaatatgagattctgataa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5400 tgcgagactgcgagtattggcaagaggccattgatttcgaacaatatgagattctgataa 5341
Query: 780 gcggattatcagaatcagttagaaacgagatcttggtcaatggcactagactgatggaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5340 gcggattatcagaatcagttagaaacgagatcttggtcaatggcactagactgatggaaa 5281
Query: 840 aarttattgaggatccaatattgagatcgcatttccaaattatatcc 886
|| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5280 aagttattgaggatccaatattgagatcgcatttccaaattatatcc 5234
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7258
Number of Sequences: 1807
Number of extensions: 7258
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)